The yWays Library Manual

Table of Contents

1. License Terms and Availability
2. Getting Started
System Requirements
3. Architecture of yWays
The Core
The UI Subsystem
The Automatic Layout Subsystem
The I/O Subsystem
4. The Core
The Topology Layer
The Layout Layer
Rendering Layer
5. The UI Subsystem
The PathwayView Bean
6. The Automatic Layout Subsystem
Force-Directed Layout Algorithm
Hierarchic Layout Algorithm
7. The I/O Subsystem
Import/Export Handlers
yWays Default Handlers
8. Practical Hints
Defining a network with the help of ReactionNetImpl
A. The yWays XML Format
Topology Layer
Layout Layer